¡¡Chinese Journal of Computers   Full Text
  TitleLanguage Capability Analysis of DNA Nanostructure¡¯s Self-Assembly
  AuthorsCHEN Yan1) FU Yan2) ZHU Meng3)
  Address1)(Applied Science College, Beijing University of Technology, Beijing 100124)
2)(Genetics, Bioinformatics, and Computational Biology, Virginia Tech, Blacksburg, VA 24061, USA)
3)(School of Computing, Clemson University, Clemson, SC 29634, USA)
  Year2008
  IssueNo.12(2160¡ª2167)
  Abstract &
  Background
Abstract The computational capabilities inherent in the hybridization of DNA molecules were examined. First, based on the Winfree¡¯s previous work which demonstrated the self-assembly of linear molecules could generate only regular language, it was proven that the linear self-assembly can also generate linear languages, by hybridizing the linear molecules which respectively represent the left and right linear derivations. Then a new way was defined to prove that the unique set of sequences equivalent to context-free languages can be obtained by mixed self-assembly of molecules with 1-, 2-, 3- sticky ends, which is a supplement for Winfree¡¯s theory that the self-assembly of dendrimer nanostructures is equivalent to context-free language.
Keywords self-assembly; language capability; sticky ends; molecule